Publications
For reading my doctoral thesis click here.
For citations and H index click here,
and for peer review summary click here.
Peer-reviewed original articles: 9
Research review articles: 1
References and Pubmed links:
- Genetic determinants of SARS‐CoV‐2 and the clinical outcome of COVID‐19 in Southern Bangladesh.
Hasan MM, Saha CK, Hamidullah Mehedi HM, Chakma K, Salauddin A, Hossain MS, Sharmen F, Rafiqul Islam SM, Tanni AA, Yasmin F, Akash AS, Hossain ME, Miah M, Biswas SK, Sultana N, Mannan A. Immun Inflamm Dis. 2024 Feb 6;12(2):e1171. doi: 10.1002/iid3.1171.
- The structural basis of hyperpromiscuity in a core combinatorial network of type II toxin-antitoxin and related phage defense systems.
Ernits K*, Saha CK*, Brodiazhenko T, Chouhan B, Shenoy A, Buttress JA, Duque-Pedraza JJ, Bojar V, Nakamoto JA, Kurata T, Egorov AA, Shyrokova L, Johansson MJO, Mets T, Rustamova A, Džigurski J, Tenson T, Garcia-Pino A, Strahl H, Elofsson A, Hauryliuk V, Atkinson GC. Proc Natl Acad Sci U S A. 2023 Aug 15;120(33):e2305393120. (*equal contribution)
- Context-based sensing of orthosomycin antibiotics by the translating ribosome.
Mangano K, Marks J, Klepacki D, Saha CK, Atkinson GC, Vázquez-Laslop N, Mankin AS. Nat Chem Biol. 2022 Nov;18(11):1277-1286.
- Sal-type ABC-F proteins: intrinsic and common mediators of pleuromutilin resistance by target protection in staphylococci.
Mohamad M, Nicholson D, Saha CK, Hauryliuk V, Edwards TA, Atkinson GC, Ranson NA, O'Neill AJ. Nucleic Acids Res. 2022 Feb 28;50(4):2128-2142.
- A hyperpromiscuous antitoxin protein domain for the neutralization of diverse toxin domains.
Kurata T*, Saha CK*, Buttress JA, Mets T, Brodiazhenko T, Turnbull KJ, Awoyomi OF, Oliveira SRA, Jimmy S, Ernits K, Delannoy M, Persson K, Tenson T, Strahl H, Hauryliuk V, Atkinson GC. Proc Natl Acad Sci U S A. 2022 Feb 8;119(6):e2102212119. (*equal contribution)
- FlaGs and webFlaGs: discovering novel biology through the analysis of gene neighbourhood conservation
Saha CK, Pires RS, Brolin H, Delannoy M, Atkinson GC . Bioinformatics. 2021 Jun 9;37(9):1312-1314.
- A holin/peptidoglycan hydrolase‐dependent protein secretion system.
Palmer T, Finney A , Saha CK, Atkinson GC , Sargent F . Molecular Microbiology. 2021 Mar;115(3):345-355.
- A widespread toxin-antitoxin system exploiting growth control via alarmone signaling.
Jimmy S*, Saha CK*, Kurata T*, Stavropoulos C, Oliveira SRA, Koh A, Cepauskas A, Takada H, Rejman D, Tenson T, Strahl H, Garcia-Pino A, Hauryliuk V, Atkinson GC . Proc Natl Acad Sci U S A. 2020 May 12;117(19):10500-10510. (*equal contribution)
- ABCF ATPases Involved in Protein Synthesis, Ribosome Assembly and Antibiotic Resistance: Structural and Functional Diversification across the Tree of Life.
Murina V, Kasari M, Takada H, Hinnu M, Saha CK, Grimshaw JW, Seki T, Reith M, Putrinš M, Tenson T, Strahl H, Hauryliuk V, Atkinson GC. J Mol Biol . 2019 Aug 23;431(18):3568-3590.
- In silico identification and characterization of common epitope-based peptide vaccine for Nipah and Hendra viruses.
Saha CK, Mahbub Hasan M, Saddam Hossain M, Asraful Jahan M, Azad AK . Asian Pac J Trop Med. 2017 Jun;10(6):529-538.